Grence

Custom Data Sets

Many of the data sets that OptimusKG uses are Kedro built-in data-sets. However, since OptimusKG relies in many different biomedical data formats, we have created a number of custom data sets.

Data sets

Gene2Go Reader Dataset

Dataset to handle Gene Ontology (GO) terms.

Lxml Dataset

Dataset to handle XML data.

OWL Dataset

Dataset to handle OWL data.

SQL Dump Query Dataset

Dataset to handle SQL queries from a dump file.

Zip Dataset

Dataset to handle zip files.

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Reactome

Reactome is a database of biological pathways.

Gene2Go Reader Dataset

Dataset to handle Gene Ontology (GO) terms.

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